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Written by Ira Steven Behr & Hans Beimler
Directed by Allan Kroeker
"Perhaps if you didn't talk so much your throat wouldn't get so dry."
-- Dukat and Weyoun
Nutshell: Very entertaining ... but also quite contrived. I'm thinking some interesting things will come out of this episode, but I'm also thinking some other things will go unrealized.
"Sacrifice of Angels" is wonderfully entertaining in a vast number of ways, and in a vacuum it would easily be worth three-and-a-half stars in my book. But, as the wrap-up (to a certain extent) of so many issues that this arc has presented, it demands to be scrutinized more heavily than a stand-alone action-adventure outing. To that end, "Sacrifice of Angels" also comes with a few noteworthy disappointments. I definitely enjoyed this episode a great deal, but there was just so much plot and action spinning out of control trying to rectify itself--and, while most of it worked, some aspects centering around the characters were left ambivalent or in some cases even a bit shallow.
This outing is primarily an all-out action-adventure installment. The only problem with all-out action is that the resolution to huge problems holding dire consequences often comes down to the microcosmic actions of a few key people, and those people are usually led around the story by contrived circumstances. "Sacrifice of Angels" is no exception; this is an episode that depends much more on the mechanics of the plot than it does its characters. Now, there's nothing inherently bad about that; in fact, "Sacrifice" manages the plot about as well as I could've expected given how much "Favor the Bold" stacked the cards against the survival of the Federation. But, at the same time, much of this episode is a good example of "comic-book DS9"--lots of fun, action, and heroism, but not as much depth as the situation was capable of.
The plot is a "race against the clock" paradigm. The Federation fleet needs to get some ships to DS9 before Dukat brings down the minefield (which is in a mere matter of hours). But with the Dominion fleet in their path, Starfleet is going to have to punch through the lines with a major fight, taking some serious losses in the process.
First, a few words about the space battle sequences. How should I put it? They weren't simply "awesome," they were "AWESOME!"--absolutely beautiful. You thought the sequences in "The Die Is Cast" were spectacular? And then "Way of the Warrior"? And then "Shattered Mirror"? And then "Call to Arms"? Well, this episode outdoes them all. I don't believe I've ever seen special effects of this caliber on a television production. These sequences are feature-film good. And they aren't simply good in the technical sense--they're also great in the visceral sense, effective at conveying the utter Pandemonium and sense of urgency facing the Defiant's attempts to race through the Dominion's front line. And the Klingons' nicely-timed arrival to the fight--as obvious as "Favor the Bold" set it up to happen--had me cheering. We're talking some serious panache here.
Meanwhile, back station-side, Damar arrests Kira, Jake, and Leeta as a precaution because he suspects Rom didn't act alone in the attempted sabotage. This puts the fate of the Alpha Quadrant in Quark's hands (Quark?); he's the only member of Kira's resistance not sitting in a cell, and someone needs to carry out Kira's last-minute plan of disabling the station's power system so that the dismantling of the minefield will be delayed.
The station-side plot unfolds on relatively simple terms, consisting of a jailbreak, a chase scene, and a race to disable the station before the minefield can be destroyed. There are some good dialog scenes along the way, especially between Weyoun and Dukat as they discuss the policy of ruling their conquered territories. Dukat's attitude that a conquered enemy should admit their being wrong for opposing their conquerors in the first place is particularly appropriate for him.
Quark and Ziyal break their allies out of jail in a scene that strains credulity but is entertaining nonetheless. I liked Quark's clever way of rendering the Cardassian guard unconscious; and I liked even better when he phasered the two Jem'Hadar guards, and especially his silent, stunned reaction to his own action. Scenes like this are good; I've always liked the serious side of Quark, and Armin Shimerman is always interesting to watch in these sorts of binds.
Odo's role in the game takes an expected turn, and if there's one significant weak link in this episode (and thus the whole war arc in retrospect) it's the extreme oversimplification of Odo's betrayal and subsequent redemption. While it's a good thing that "Favor the Bold" last week made it clear Odo was not so completely won over by the Female Founder as "Behind the Lines" had initially indicated, the way events unfold here only serve to make Odo's betrayal feel that much more short-term, contrived, and shallow.
Sure, it's certainly reasonable that Odo being so initially overwhelmed by the Link in "Behind the Lines" could've greatly affected his personality on a "merely temporary" basis. It's not really all that implausible. But to so quickly reverse his direction in life (from following the Link and instead deciding once again to remain with "solids") with a single act of redemption--coming to Kira's rescue in her desperate hour of need--possibly also reverses all the consequences that should've come with his initial betrayal. I'm going to reserve judgment, but Kira should not so easily forgive Odo for what he did; it should take some real time. Unfortunately, by supplying Odo with one, big redeeming action it seems the writers are trying to do just that--which very much strikes me as the Easy Way Out. This is Reset Button Mentality. Frankly, I expected this sort of redemption from the onset of Odo's betrayal. But I just hope Kira and Odo aren't laughing over a morning raktajino in Odo's office next week.
Still, the actors and director did a good job with what they had. There's a striking moment where it seems the Female Founder knows that her mission to bring Odo into the fold has failed. Salome Jens and Rene Auberjonois work wonders with nonverbal subtexts; when she asks Odo if he's sure he wants to remain in his quarters and Odo responds that yes, he's sure, there's something about each character's mannerisms which shows that much more is being asked and answered than what is spoken in dialog. And David Bell's score during this scene is incredibly sinister-sounding. (Bell continues to work wonders in the Trek musical arena, and his score for "Sacrifice" feels larger-scaled than the average episode.)
There are a lot of contrivances that work to resolve the plot. These events are reasonable examples of "suspension of disbelief," although they don't aspire to the greatness that most of this arc has. Take for example (1) The Defiant being the only ship that is able to successfully navigate through the hole in the Dominion lines; (2) the Klingons showing up on the battleground In the Nick of Time; (3) Dukat deciding not to commit any ships in pursuing the Defiant ("The Defiant is no match for the station. If Sisko wants to commit suicide, I say we let him."); (4) the aforementioned Odo coming to Kira's aid when she's locked down under Jem'Hadar fire; and (5) Rom disabling the station weapons, thereby making it a vulnerable target for the Defiant when it arrives. By the way--gaping plot hole of the week: What about all those Dominion ships around the station? It's as if the writers forgot about them. Why didn't they attack the Defiant? And why, especially, did Kira and Rom assume those ships wouldn't detonate the minefield if the station's weapons were off-line?
I did appreciate that Rom's efforts to shut down the weapons came too late (and the destruction of the mines was a spectacular sight). And "Sacrifice" does a good job of building suspense around its contrivances. But, substance-wise, most of the episode comes down to the final two acts, centering around the interesting choices of two characters: Sisko and Dukat.
Sisko and the Defiant arrive at DS9 too late. The minefield is gone and the Dominion reinforcements are waiting on the other side of the wormhole. Sisko's decision is one that can't possibly end in anything but certain death: He takes his ship into the wormhole, planning to fight off as many ships as he can. While in the wormhole, however, he is contacted by the Prophets, who tell him he can't be permitted to die. Sisko tells them they have no right to interfere.
The results of this scene are the most fascinating aspects of "Sacrifice." Through a semi-confrontational dialog with the wormhole aliens, Sisko informs them that he will die for his cause, whether he is the Emissary or not. But when the Prophets continue to resist, he explains himself: He needs a miracle, because Bajor and the Federation are not going to survive without one. Sisko asks the Prophets to stop the Dominion ships. The Prophets finally agree, and make the incoming Dominion ships vanish into oblivion.
Now, my first reaction was that this is deus ex machina taken to the most literal of extremes. But the more I think about it, the more I like it. We knew the Federation was going to survive, yet we also knew the odds were impossible. We knew the Dominion would have to take a major loss. We knew Starfleet would get the station back. So what matters most is the impact this all has on the characters. And within Sisko's negotiation with the Prophets is something that I think shows some real promise, and will come back to haunt the captain at some point down the road. Just before the Prophets send Sisko back to the Defiant, they come to a consensus that Sisko must make penance for going against his own apparent role as Emissary. One says, "The Sisko is of Bajor but he will find no rest there." Another says "His pagh will follow another path." Then they send him back to his ship, without answering him when he asks, "What path is that?"
Sisko's question is not answered here, but it does bring up some fascinating possibilities for the future, especially coming off the heels of Sisko's speech in "Favor" that reemphasized how much Bajor means to him. This is going to have significant personal consequences, without a doubt.
When the Defiant comes out of the wormhole but without a Dominion fleet on its tail, everybody is understandably flabbergasted. While the sudden shift in momentum is decidedly forced and all too abrupt (at this point reports instantly begin coming in that Federation ships have broken through the lines and are headed toward the station), I did find Weyoun's line, "Time to start packing," quite amusing, even if totally silly.
And, ah yes--Dukat. Dukat's descent into madness resulting from victory unfathomably slipping through his fingers is well-conceived. Maybe a tad over the top, but nice nonetheless. Yet, as always, there's more to this guy than meets the eye. The fact that he's determined to find Ziyal before evacuating says something about him. Yes, he loves her, but it also comes back to wanting to see his actions justified and his past forgiven. Doesn't happen here. Damar kills Ziyal when he finds out she was the one who busted Kira & Co. out of jail. Dukat is left broken and destroyed, and the Dominion evacuates the station without him.
A broken and destroyed Dukat. It's poetic justice. A guy who has gone from an administrator to a nobody to a rebel to a warlord now becomes ... nothing. Not dead--but lost, imprisoned, and with a dead daughter who can never forgive him. I'm not sure when we'll see him again or what he'll be doing, but it would definitely be interesting to see. Dukat's life is something of a tragedy. He's a villain, but still a tragic figure, his demise brought on by his own actions.
And then he gives Sisko back his baseball.
With the meaty undertones of Sisko and Dukat's themes, "Sacrifice of Angels" is definitely satisfying in several ways. And as adventure television, the show is often exhilarating. But because of the pervasive contrivances and the way Odo's theme falls so short, I wouldn't say it's truly great DS9--especially considering the strength of all the prior buildup. As far as a rating goes, we'll put it on the high end of the three star range. A must-see for the pure entertainment of it--but not everything it could've and probably should've been.
Next week: A wedding of galactic proportions.
Previous episode: Favor the Bold
Next episode: You Are Cordially Invited
Small note. Garek's expression when the Klingons arrive had me in tears of laughter XD
But what they really did well was to start using all three dimensions in their battles - the ships duck, weave, loop and swerve. How different from the old TNG days where the Enterprise would sit in front of Alien ship x whilst Worf or Yar said 'shields down in ten percent increments'. Very well choreographed and realised.
Like Jammer I have my reservations about the episode overall - particularly how Dukat descends into madness so quickly, and about Odo's recent character wranglings.
Personally I was never really satisfied with Dukat from this point onward (particularly his Pagh-Wraith arc).
I think it would have been better if the wormhole aliens had simply agreed to close the wormhole (perhaps expelling the ships to their respective quadrants)instead of seemingly vaporizing thousands of lives with no particular qualms about it.
The wormhole aliens don't really care about lives. At least not in the way that we do. To them, "time" is an artificial construct, not important at all. And that means that death is not an important event.
It would've been nice if there was some acknowledgment of what happened by the Dominion... Bajor's gods are certainly more powerful than the Dominion's.
In my mind it's too easy an end to what has until now been a nail-biting, gritty, angry war. Does this mean the Prophets can now be asked to delete every hostile alien travelling through the wormhole? Taking the easy answer has never been DS9's style, which is why I have come to love this show so much.
As for Dukat, his descent into madness has been occurring gradually for a few episodes now, although I work in mental health so it was probably more apparent to me.
1) The timely intervention of the Prophets (and let's face it there was no other way out, the writers saw to that). It felt very contrived and convenient, as I have heard used a true "Deus Ex Machina".
2) The way everyone just glosses over Ziyal's death. I personally liked her character (although I am admittedly a romantic) and thought her occasional appearences brought more depth to the show. Not only did her passing deeply sadden me, but it also felt wasted, as events which followed seemed to treat it as if "meh, whatever." Garak didn't seem to show any particular emotion for the one person who thought the world of him. Dukat for all his sadness and distress at her death, seemed to brush it off as soon as the writers were ready for him to become a single-minded bigot in Waltz. His words of "I forgive you" to Sisko were abandoned and forgotten. It felt so pointless. And I'll be touching upon that, most likely again, when I check out the review of Tears of the Prophets...
In "The Best of Both Worlds", Starfleet sends 39 ships against the Borg, and loses them all. this is a HUGE blow and Starfleet is shown to be short-handed for at least a year because of this. My assumption at that time was that Starfleet had somewhere between 100-500 ships. Now we learn that there are at least nine fleets of about 300 starships, for a total of almost 3,000 ships. If they had 3,000 ships why would they only have been able to send 39 to fight the Borg? The episode would have been just as exciting if it was 60 ships against 125 Dominion ships. In any case, I'm sure we don't actually see any more than that in the episode.
I imagine they figured Ziyal had to die to forward Dukat's storyline for the remainder of the series.
That just further compounds a reason to dislike how they handled things, really. Because they took all the development Dukat'd made over the years and chucked it out the window so he could be taken over by the "Evil Fire Monster" as Confused Matthew amusingly puts it. Dukat doesn't strike me as so stupid or naive that he'd literally believe it was Sisko who got his daughter killed, especially since this didn't even come up when they were together in the other episode later this season. If her death had led to something better for Dukat.. proper motivation, development, etc.. I wouldn't have minded so much. But it was just a pathetic way to kill her off, and Garet hardly even seemed to care despite their connection. Not unlike how Sisko didn't even SAY anything to Jadzia as she lay dying, despite their deep connection.
@Nic and Latex Zebra
If you think realistically, I'd say that it's kind of like the United States became after the last couple wars. Decreased forces, less vessels, etc. I don't think Starfleet was even truly prepared for a massive war when the Borg came around. They'd been fairly neutral during the Cardassian war with Bajor, had treaties with the Romulans and an alliance with the Klingons. There was no need for a great many ships ready for some war. After the Borg, everyone likely realized just how unprepared they'd all been and started making more warships. There WERE a good number of years between the Borg assault and the Dominion War, as evidenced by Jake's aging over the series. Don't forget each season was really supposed to have been a year.
See, I think that's just silly. The entire Trek universe shouldn't be bound by the effects capabilities of Best of Both Worlds. At the time, 39 ships was a lot to make. And given that the show was just about one ship, moving around the Galaxy, 39 ships seemed like a ton (We never saw more than probably what, 5 in a show on the series otherwise). However, as we saw time and again on DS9 (Think Way of the Warrior, The Die is Cast, and Call to Arms before this) effects technology had come a long way since then. There were easily more than BoBW numbers in each battle, and they looked incredible. Moreover, in DS9 we got a lot more of looking at big picture intergalactic politics. The fates of the entire Federation / Cardasian Empire / Klingon Empire etc. played out on screen, not just whatever sector the Enterprise was in. The huge fleets we see in the whole War Arc are important because they drive home the scale of the conflict: It's a galaxy wide conflagaration with hundreds of planets in jeopardy. A battle of 120 ships vs. 60 for the entire Alpha Quadrant would just feel small. If you have the capability to make the big fleets, use them! Deciding that there can't be a big fleet because of one episode made almost a decade ago is the worst kind of continuity.
That said, the intervention of the WA/prophets served as a jarring and painful reminder of what is wrong with this show. I was really getting into this latest arc. In spite of myself, I was impressed with the writing and the acting and the pacing; the CGI was just icing on the cake. Then we get these disgusting creatures of the wormhole intervening on Sisko's behalf. Whatever the ramifications "might be" (please as if no one could piece together that his stupid speech about a house on Bajor didn't come to mind) to him, everything in his conscience and his training should be utterly horrified by a species which deals out death to tens of thousands of aliens, but shows favouritism to one planet of people, oh but won't actually do anything to prevent them from being raped and tortured for fifty years...
I can accept that these aliens don't concern themselves with our affairs--it's akin to Starfleet's relationship with the prewarp--but to be so damned arbitrary whilst so deadly whilst so specific and demanding that are to be seen as Gods by their own accord is a terrifying notion. And they're the good guys?
Again, it seems like Sisko is more concerned about Bajor than anything else (even his own son?!), yet the brass ignore his near insanity and just keep on promoting him.
At least they didn't wrap up with Jake's stupid article getting published...
That aside, it appears to be that you're saying "plot isn't important" or that it's "only partially important", when that couldn't be further from the truth. At the basis of ANY show, should be a good plot or premise, and I do believe DS9 had a good one when it started out.
That said, I do believe the final season (and some of the 6th) was not thought out very well and could have been done a whole lot better. However, lemme see if I can work something out based on what I remember about the episode and the show itself...
The ships the Prophets destroyed, the back-up, coming to help the Dominion/Cardassian forces were enroute via the wormhole, correct? It is the one place we know the prophets have any actual power of manipulation in. Insofar as I can remember, the "Wormhole Aliens" never actually manifested themselves beyond visions outside of it - and keep in mind that's only cause I don't remember them ever doing so - with the sole exception of that episode with the Pagh Wraith taking over Jake and Kira (which felt like a bullshit episode meant to support stuff that'd happen in season 7, although it was performed well)..
Okay, so you're saying that because the Prophets make a fleet _within the wormhole_ vanish, but don't interfere with events outside the wormhole itself, that makes them selfish hypocrites? And that cause this was the only thing Sisko could think of to win, that makes him insane and a bad person? I'm sorry if I'm not following your logic.
Yes, the whole thing was terribly written and the consequences or actions don't really measure up/balance out. But that's not the same thing as calling Sisko insane for trying to help Bajor (which in case you forgot is kind of why he was there to begin with), or saying that cause the Prophets intervened on his behalf _at a time when they actually could_ was irresponsible and thoughtless of him (or them)?
As I said, I'm just not getting where you're coming from on that part.
It's acceptable, barely, to use a deus ex machina to resolve a single-episode storyline, and we have seen this before, at least once. There was that episode when the 'other' emissary arrived from the past, and in the end Sisko could only resolve the issue by going back to the prophets and asking them to specifically say which of them was the 'real' emissary.
As a writer, it's frustrating to have to use a device like the prophets apparently awesome power to resolve a plot. You are admitting that you couldn't think of a better way to end the story. In the emmissary story I mentioned, this is at least a resolution that fits the plot, so it doesn't seem too creatively bankrupt.
And as a writer on a series like Trek, if you establish the existence of a super-power like the prophets right at the start, you are very conscious that you cant just invoke them whenever you like to resolve any story. If Sisko could really just go into the wormhole whenever he liked, come to a full stop, and wait to be taken to the prophet's reality to beg them to do him a favour, then almost every story in the entire series could have been resolved a lot easier. Have they ever denied him when he asked for help?
So, the writing team had a long time to come up with a way of ending the occupation of DS9, and of making sure the jem'hadar reinforcements don't make it through the wormhole.
But if all they could come up with was a 1-minute miracle where the prophets simply 'deleted' the entire dominion fleet just seconds before they entered the alpha quadrant and doomed the entire quadrant to defeat, well, that is just incredibly embarassing for the writers.
In about 5 minutes of thought, I can come up with a few other ways to destroy that fleet without resorting to the prophet miracle. The defiant could have tried to close the wormhole, perhaps using some new type of torpedo that starfleet had been working on in secret to overcome the stability that was added by the fake bashir.
Perhaps they could have invented a new kind of warhead that would ignite some kind of plasma inside the wormhole that would destroy the entire jem-hadar fleet without closing it.
Or, perhaps, the could actually build on the freaking 'white' storyline that they started when the Defiant destroyed the only white depot in the alpha quadrant a few episodes ago. Remember that? The Jem Hadar should have run out within a couple of weeks, remember? But here we are months later, and that whole storyline has just been abandoned, with no explanation at all. Perhaps the Jem'Hadar that are already in the alpha quadrant should be slowly going insane because of the white shortages, with only a tiny number of Jem'hadar on DS9 still having a supply and able to defend the station against the now-crazed rest of the warriors. So, just a the DS9 manages to detonate the mines and open the wormhole, the crazed Jem'Hadar go in themselves to try and get more 'white', and they engage the reinforcements themselves and the two fleets manage to destroy each other almost completely.
That would be kind of cool and would actually tie up the story started weeks ago that went nowhere.
So... I really don't understand what goes on with Braga, Behr, and the rest of the top-level creatives in the Trek franchise. They should be ashamed to have to resort to such a weak solution to the problem of reinforcements coming from the Gamma quadrant. They should be ashamed to have not done anything with the 'white' shortage created a while back.
I've never read any of the supplementary material about DS9 and Trek that reveals some of the writer's thoughts and motivations. Maybe these questions are addressed already. But this episode in particular completely ruined the story for me, the excellence of the previous 5 or 6 episodes (not including Sons and Daughters), and the season as a whole. It was dumb. As soon as I saw the defiant enter the wormhole and stop, I literally groaned with despair. I couldn't *believe* they were going to do this.
Then they did it.
""Bajor's gods are certainly more powerful than the Dominion's.""
Yes, and Weyoun witnesses it. Which is why it is baffling when lateron, in Season 7, Weyoun dismisses the Prophets when Damar mentions them in a conversation about the Founders. Yes, Vorta are bred to revere the FOunders, but that surely can't blind him to the Prohpets power when he bore actual witness.
Even though Sisko's role as Emissary ended up being kind of a letdown in "What You Leave Behind", I don't think it takes away from this episode. The Prophets interfered because they NEEDED Sisko for another task and couldn't let him die right there and then. He made it clear that the only way to do that was to destroy the fleet, so they did.
What you are saying is that the prophets interefered this time because Sisko was needed alive for their future projects and by the time he spoke to them, the only way to keep him alive was to obliterate the incoming fleet.
I don't buy it. They could have just magically transported Sisko onto the planet Bajor instead, and let the fleet come through and wipe out the defiant on the way through.
If the prophets realised that letting the Dominion fleet come in would lead to them taking control of the entire alpha quadrant, and *that* was incompatible with their long-term goals that Sisko is involved in, then why didn't they interfere a hell of a lot sooner?
The prophets can see all possible futures anyway, so they should have known full well that the Dominion reinforcement fleet will never be allowed to enter the Alpha Quadrant. Surely then they would have simply not allowed any Dominion ships to enter the Alpha quadrant at all... ever.
All of this just leads to a very deep rabbit hole that can't easily be closed. It's far better to not let the story get to the point where huge arbitrary interference is needed by these 'Gods' in the first place. As I said in my previous post, the writers should have been able to think of an 'organic' storyline that stopped the Dominion reinforcements from entering the quadrant, and the prophets should stay as a god-like force that nevertheless does not interfere directly in the wars of mere mortals.
As for a final rating I'm going to go: 3 stars.
However there are some major problems with this episode (and the war arc in general), as the Federation had 4 key victories during the war arc but still seemed to be losing.
1) The shipyards that were destroyed in "Call to Arms". Were they repaired? Shouldn't that hinder their fleet rebuilding process?
2) The Ketracel White issue. Everyone has brought this up. It was deemed a victory in "A Time to Stand" but nothing came of it. It needed to be mentioned, but never was.
3) The sensor array in the Argolis Cluster. Shouldn't the Dominion now have trouble tracking ship movements (they seemed to know exactly where the Federation ships were in a "Favor the Bold").
4) The Prophets. I am willing to forgive the writers if something came of it, which it did the ultimate letdown of Sisko's arc in "What You Leave Behind". However, the destruction of 2300 ships just seemed to be taken in stride (as stated above) by the Founder and Weyoun. Were the Dominion weakened in the Gamma Quadrant? How vulnerable were they in the Alpha Quadrant? The Founder ordered all ships back to Cardassian space, so it seemed everything was going to status quo before the war. What annoyed me was that even after all these defeats the Dominion were still going to win (as we see in "Statistical Probabilities" before the Romulan intervention). I thought maybe a mention should have happened about the happenings in the Gamma Quadrant, in that maybe stoke a rebellion there to help destabilize the entire Dominion. It seemed that the Gamma Quadrant was seen less and less in the later seasons of DS9, and it maybe should have been mined (pun intended) for plot devices to meet new aliens there to help the fight against the Dominion there.
5) The ships around the station were mentioned, when Nog stated they were leaving and Sisko said "let them go, as we're in no position to fight". What would have been more exciting is Kira/Rom re-activated the weapons system and fought those ships off to give the Federation/Klingon fleet cover.
6) Dukat's descent into madness was quick, but still believable. Everything he ever wanted was gone....again.
7) Bajorans helped Kira deactivate the stations weapons system....shouldn't that affect the Non-Aggression Pact with the Dominion?
8) All in all, this episode was going to have flaws because it was concluding so much. Was the war-arc successful? Yes it was. However, there could have been improvements as the writers dropped the ball as "major events" in each episode were just completely forgotten the next week during an arc in which continuity was important.
The issue about the size of the Federation fleet is less egregious, in my mind. Throughout TNG, we heard lines about ships going on long exploratory missions (the Gandhi, the Aries). In fact, the ship Bashir's med school rival was stationed on (the Sutherland?) in the early DS9 days was sent on a long mission, too.
My guess is that the Federation started building more ships after the Borg encounter and started bringing ships out from far-flung reaches as early as season 3 of DS9 (with the looming Dominion threat, with the Maquis, and certainly after the Klingon attack on DS9 in season 4). Thirty-nine ships might have been a big blow when hundreds were on the outskirts and before the Starfleet post-Wolf 359 buildup.
It's also possible that Starfleet took losses in the wars with Cardassia and the skirmishes with the Txengethi (sp?). Maybe 2364-67 was a sort of low point in available ships for Starfleet.
One other reason to think this: The Enterprise-E launched just two years after the D was destroyed. Clearly, Sovereign-class ships were being built before 2371.
Now, why the Federation flagship had, apparently, no role in the Dominion war is something that I've never understood. Even a line about the Enterprise leading a task force would have been appreciated. Otherwise, it could be assumed that Starfleet wasn't sending all its ships into the war -- which makes little sense.
As to the Prophets, I appreciate the scene as the culmination of the "Emissary Trilogy" of Destiny/Accession/Rapture. He goes from not believing in the "wormhole aliens" to going to the mountain top a desperate man, asking for his gods to bring him a miracle. It's the doubting Sisko parting the Red Sea, and for that, it works.
Asmto the "The Sisko is of Bajor but will find no rest there" I buy it as well, since the ending of "What You Leave Behind" for me echoes The Visitor. Like in that episode, we leave with Jake alone, looking out the window for a missing father, and we have Sisko stranded out of time. Given how that timeline turned out, it's not exactly a happy ending for our Captain.